BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H01SP1|AL425935
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1536 1545 0.0
>3x_Contig1536
Length = 11572
Score = 1545 bits (778), Expect = 0.0
Identities = 787/790 (99%), Gaps = 1/790 (0%)
Strand = Plus / Plus
Query: 1 atctatttataacacaatgcaagtwatcgaatataaaaagataaaatcaccagtaatgat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8366 atctatttataacacaatgcaagtaatcgaatataaaaagataaaatcaccagtaatgat 8425
Query: 61 acaaacagtttttttacttcttgatatgtaagttatgctaaattgcactgtttatctatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8426 acaaacagtttttttacttcttgatatgtaagttatgctaaattgcactgtttatctatg 8485
Query: 121 ttctgtagtatagtaatcgaattaagaagctccatagagagttttaaaacgtggtttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8486 ttctgtagtatagtaatcgaattaagaagctccatagagagttttaaaacgtggtttagc 8545
Query: 181 tgggttcattttgataaagcctcttcctgaccacttaacaaagtaaaagatggtgcctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8546 tgggttcattttgataaagcctcttcctgaccacttaacaaagtaaaagatggtgcctgt 8605
Query: 241 agtttttgagtacctttcaagaaatccaactccataacgaaacagaactccaagatgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8606 agtttttgagtacctttcaagaaatccaactccataacgaaacagaactccaagatgttt 8665
Query: 301 gcattcaactgcaaagccaagtcaccggctgcttttgcggasc-accggtggcaatgata 359
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 8666 gcattcaactgcaaagccaagtcaccggctgcttttgcggagccaccggtggcaatgata 8725
Query: 360 tcatcgacaataacgacgtttgaatgttcagggatagaatcagcctggatttcgaaaaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8726 tcatcgacaataacgacgtttgaatgttcagggatagaatcagcctggatttcgaaaaca 8785
Query: 420 tcttcaccgtactccttagcataaactgcgtgtacaacttcaccagcaagcttaccttgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8786 tcttcaccgtactccttagcataaactgcgtgtacaacttcaccagcaagcttaccttgc 8845
Query: 480 tttctcaccggtacaaaaccagcatcaagagccagagctagggctgggccaaatagaaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8846 tttctcaccggtacaaaaccagcatcaagagccagagctagggctgggccaaatagaaac 8905
Query: 540 ccccgggcttctaagccaatgacatagtcgatcttcttgcctgtgaatttctcttgcagg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8906 ccccgggcttctaagccaatgacatagtcgatcttcttgcctgtgaatttctcttgcagg 8965
Query: 600 tgaagcttgaaggattcaatcaatttcttgaacaattgagggtctctgaaaattggtaag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8966 tgaagcttgaaggattcaatcaatttcttgaacaattgagggtctctgaaaattggtaag 9025
Query: 660 aaatcttcgaataggataccctcttgtgggaagtttgggtactgacgcaaagcacctttc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9026 aaatcttcgaataggataccctcttgtgggaagtttgggtactgacgcaaagcacctttc 9085
Query: 720 aactcagtagcatattcagtgatagacatcttccacttgatattcttatgacaagtgcaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9086 aactcagtagcatattcagtgatagacatcttccacttgatattcttatgacaagtgcaa 9145
Query: 780 taggttcttc 789
||||||||||
Sbjct: 9146 taggttcttc 9155
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6131
Number of Sequences: 1807
Number of extensions: 6131
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)